April 21, 2020 - Comparing Color Spaces for Male and Female Gonad Segmentation
Lab Work
April 15, 2020 - Looking at more Images using New Color Segmentation Method
Lab Work
April 14, 2020 - Trying out Color Thresholds determined via New Color Segmentation Method
Lab Work
April 9, 2020 - Continuing New Image Segmentation Process (Looking at other color spaces)
Lab Work
April 8, 2020 - Continuing New Image Segmentation Method
Lab Work
April 2, 2020 - Continuing New Color Segmentation Method
Lab Work
April 1, 2020 - Refreshing Memory on Lab Work so far and Continuing New Image Segmentation Method
Lab Work
March 11, 2020 - Trying out new color segmentation method part 4
Lab Work
Trying out new color segmentation method part 3
Lab Work
March 9, 2020 - Trying out New Color Segmentation Method Part 2
Lab Work
March 4, 2020 - Trying out different Color Segmentation Method
Lab Work
March 3, 2020 - Seeing Replicability of Script
Lab Work
March 2, 2020 - Continuing to Figure out how to make a new contour
Lab Work
February 26, 2020 - Making New Contours Part 1
Lab Work
February 25, 2020 - Splitting Contour Via Nearby Points Part 2
Lab Work
February 24, 2020 - Testing out Distance threshold & Separating contour through nearby points
Lab Work
February 19, 2020 - A step closer to figuring out how to split the contour?
Lab Work
February 18, 2020 - Continuing to Figure out how to split a single contour
Lab Work
February 12, 2020 - Finishing Undergraduate Research Symposium Application & Continuing to Figure out How to Separate Objects in Image
Lab Work
February 11, 2020 - Figuring Out How to Segment out Individual Objects in a Large Contour
Lab Work
February 10, 2020 - Continuing to Improve Abstract and Seeing Replicability of Image Segmentation
Lab Work
February 5, 2020 - Determining Area of Segments in Histological Image based on Scale Bar
Lab Work
February 4, 2020 - Creating Abstract and Labeling & Thresholding Gonad by Size
Lab Work
February 3, 2020 - Preliminary Stages of Abstract for Undergraduate Research Symposium and Increasing Accuracy of Color Segmentation using OpenCV
Lab Work
January 29, 2020 - Looking more into Color Segmentation
Lab Work
January 28, 2020 - Looking More into OpenCV Image Analysis as well as Other Methods
Lab Work
January 27, 2020 - Debugging Blob Detection with OpenCV and trying out Manual Thresholding with ImageJ
Working Remotely
January 22, 2020 - Tensorflow update and Trying out OpenCV
Lab Work
January 21, 2020 - Finding Other Potential Ways to Analyze Histology Images and Referencing Papers for Gonad Sex and Stage Determination Practice
Lab Work
January 15, 2020 - Histology Image Processing Research Part 1
Lab Work
January 14, 2020 - Histology Analysis - Gonad Sex and Stage Determination Practice and Feret's Diameter & Using ImageJ
Lab Work
January 13, 2020 - Histology Identification Practice and ImageJ
Lab Work
January 8, 2020 - O. angasi Histology Papers Part 2 and Gonad Sex/Stage Identification Practice
Lab Work
January 7, 2020 - O. angasi Histology Papers
Lab Work
January 6, 2020 - Transferring Larvae to Ethanol Part 5
Lab Work
December 5, 2019 - Gel Electrophoresis Round 2 & Transferring Larvae to Ethanol Part 4
Lab Work
December 4, 2019 - PCR Part 2 & Transferring Larvae into Ethanol Part 3
Lab Work
December 3, 2019 - Transferring Frozen Larvae to Ethanol Part 2
Lab Work
November 27, 2019 - O. angasi Background Research
O. angasi Background Research
November 26, 2019 - Oyster Species Determination PCR and Gel Analysis & O. angasi Project
Oyster Species Determination - PCR and Gel Analysis
November 21, 2019 - Oyster Species Determination Using Gel, Olympia Oyster Ethanol Concentration Results, and Possible Research Project Ideas
Today, I did three main things:
November 20, 2019 - Oyster Species Determination using PCR
Today, I worked with Sam to create a master mix for PCR analysis of the samples that were received from the oyster distribution company. The samples that I had to create master mixes for are: 9, 10, 11, 12, 21, 22, 23, 24, 33, 34, and 35, with one extra tube being used as a negative control.
November 19, 2019 - Past Research & Isolating and Quantifying DNA for Species Determination Observation
Today, I looked through past undergraduate research done at the Roberts lab to get an idea of the kind of research that has been done in the past as well as to get a better idea of what I might potentially be interested in researching.
November 14, 2019 - Transferring Frozen Larvae into Ethanol Part 1
Today, I began helping Laura with transferring frozen Olympia oyster larvae from her experiment studying temperature and food effects on the parental generation and the subsequent effects that may have been experienced by the larvae.
November 13, 2019 - Growth Rate Based On Size Distributions
Recap of Yesterday
November 12, 2019 - Juvenile Geoduck Data Analysis
Since I have completed all of the geoduck measurements on ImageJ and have put them all in the shell length google spreadsheet (refer to my last post), I will begin analyzing this data with Shelly using R.
November 7, 2019 - First Post
First post on github, which is pretty exciting!